A simplified guide to genomic vulnerability

Predicting the future for biodiversity

Conservation biology is frequently referred to as a “crisis discipline“, a status which doesn’t appear to be changing any time soon. Like any response to a crisis, biologists of all walks of life operate under a prioritisation scheme – how can our finite resources be best utilised to save as much biodiversity as possible? This approach requires some knowledge of both current vulnerability and future threat – we need to focus our efforts on those populations and species which are most at-risk of extinction in the near (often immediate) future.

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Sweeping under the genomic rug: hard and soft sweeps

Of alleles and selection

If you’ve read this blog more than once before, you’re probably sick of hearing about how genetic variation underlies adaptation. It’s probably the most central theme of this blog, and similarly one of the biggest components of contemporary biology. We’ve talked about different types of selection; different types of genes; different ways genes and selection can interact. And believe it or not, there’s still heaps to talk about! Continue reading

Managing genes in conservation and industry

The fundamentals of population genetics

Many times in the past, we’ve discussed the importance of genetic diversity within populations as a foundation for adaptation and evolution. It includes both adaptive variation (which encompasses genetic variation directly under natural selection), as well as neutral variation (which is predominantly generated and maintained by non-selective forces such as demographic history and genetic drift). This pool of genetic variation acts as the underlying architecture for evolution by natural selection, and is a critically important component for future and ongoing evolution.

This all sounds important from an academic perspective: that population genetics can reveal a significant amount of information about the processes and outcomes of evolution and provide novel insights into concepts that have been around for ages. But how can this information be applied to real scenarios? With the ever-growing availability of massive genetic datasets for an increasing number of species, the sheer volume of information in existence that can be used is monumental.

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Rebuilding the genomic architecture of evolution

Beyond mutations in the genome

Although genetic variation is, in itself, often considered to be one of the fundamental underpinnings of adaptation by natural selection, it can appear through a number of different forms. Typically, we think of genetic variation in terms of individual mutations at a single site (referred to as ‘single nucleotide polymorphisms’, or SNPs), which may vary in frequency across a population or species in response to selective pressures. However, we’ve also discussed some other types of genetic-related variation within The G-CAT before, such as differential gene expression or epigenetic markers.

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From coast to continent: how our freshwater biota travelled across the landscape

The Australian aquascape

To anyone who has lived within Australia for a given period time, and likely many from across the globe, it is clear that water is a precious resource. Rainfall across much of the continent is patchy and variable, and the availability of water is a critical aspect in the distribution, survival and evolution of many Australian species. Expectedly, these aspects play an even bigger role for those taxonomic groups that heavily rely on the presence of water; freshwater-dependent taxa such as fish, amphibians or aquatic invertebrates show a keen evolutionary relationship with water across the landscape.

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